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As I said, I din't use other Atmel's processor yet, so, forgive me if I say garbages. But, I think that you have some kind of straps where you can choose how to boot from internal ROM ( internal bootrom ). The only way SAM-BA connects with your processor is through internal bootrom. Is the bootrom that initializes the USB device interface and this the way how SAM-BA can see other devices, such NAND, NOR flashes and so on. You must see in the first line of the first window of SAMBA: USB\arm0
Don't forget to choose your EVB in the second line.
Regarding OV7740, I am confortable about, because I am using and programming this image sensor for a year now, and with a strong support from Omnivision.
But, it is not an easy task to adapt the linux driver. There are some "hidden" details that must be found in other modules, for example, from ISI driver. Anyway, I am in the process right now. I hope next monday, I will have the first draw of OV7740 linux driver.
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